Issue 1

Journal for Veterinary Medicine, Biotechnology and Biosafety

Volume 3, Issue 1, March 2017, Pages 5–11

ISSN 2411-3174 (print version) ISSN 2411-0388 (online version)

INDICATION AND SPECIES DIffERENTIATION Of THE BABESIA PROTOZOAN GENuS BY THE POLYmERASE CHAIN REACTION

Mokryi Yu. O., Ksyonz I. M., Pochernyayev K. F., Kurman A. F.

Institute for Pig Breeding and Agroindustrial Production of NAAS, Poltava, Ukraine, e-mail: pigbreeding@ukr.net

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Citation for print version: Mokryi, Yu. O., Ksyonz, I. M., Pochernyayev, K. F. and Kurman, A. F. (2017) ‘Indication and species differentiation of the Babesia protozoan genus by the polymerase chain reaction’, Journal for Veterinary Medicine, Biotechnology and Biosafety, 3(1), pp. 5–11.

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Citation for online version: Mokryi, Yu. O., Ksyonz, I. M., Pochernyayev, K. F. and Kurman, A. F. (2017) ‘Indication and species differentiation of the Babesia protozoan genus by the polymerase chain reaction’, Journal for Veterinary Medicine, Biotechnology and Biosafety. [Online] 3(1), pp. 5–11. Available at: http://jvmbbs.kharkov.ua/archive/2017/volume3/issue1/oJVMBBS_2017031_005-011.pdf

Summary. According to the information obtained from numerous literature sources, the Babesia protozoan genus is known to be the most thoroughly studied as to the structure of the gene encoding 18S of ribosomal RNA. Based on the information provided by the international database of DNA sequencing ‘GenBank’, conservative and polymorphic sites of the above gene’s nucleotide sequences belonging to different Babesia species have been defined using MEGA4 software. The conservative 18S gene region of rRNA has been used to develop the system of oligonucleotide primers allowed to indicate DNA of six representatives of Babesia species. Variable regions of this gene were used to develop oligonucleotide primers for Babesia canis, Babesia bovis, and Babesia divergens representatives DNA identification on species-specific level. The multiplex PCR diagnostic test system has been developed for determining presence of DNA of the representatives of six Babesia genus species (B. canis, B. divergens, B. caballi, B. major, B. bigemina, B. bovis) in any biological sample. The research results of biological samples confirmed the sensitivity and analytical specificity of the developed PCR test system for the diagnostics and differentiation of the certain Babesia genus species.

Keywords: Babesia, multiplex PCR, test system, oligonucleotide primers, indication, differentiation

References:

Adaszek, Ł. and Winiarczyk, S. (2010) ‘Application of the SYBR green real-time HRM PCR technique in the differentiation of the Babesia canis canis protozoa isolated in the areas of eastern Poland’, Parasitology Research, 106(5), pp. 1253–1256. http://dx.doi.org10.1007/s00436-010-1784-3

Boustani, M. R. and Gelfand, J. A. (1996) ‘Babesiosis’, Clinical Infectious Diseases, 22(4), pp. 611–615. http://dx.doi.org10.1093/clinids/22.4.611

CLSI (2000) Laboratory Diagnosis of Blood-borne Parasitic Diseases; Approved Guideline. CLSI document M15-A. Wayne, PA: Clinical and Laboratory Standards Institute. ISBN 1562384015

Gill, G. W. (2013) Cytopreparation: Principles and Practice. New York: Springer. http://dx.doi.org10.1007/978-1-4614-4933-1

Kalendar, R., Lee, D. and Schulman, A. H. (2014) ‘FastPCR software for PCR, in Silico PCR, and oligonucleotide assembly and analysis’, in Valla, S. and Lale, R. (eds.) DNA Cloning and Assembly Methods. Methods in Molecular Biology, 1116. New York: Springer, pp. 271–302. http://dx.doi.org10.1007/978-1-62703-764-8_18

Lets, V. V., Prus, M. P., Bilyk R. I. and Kyivska, G. V. (2015) ‘Measures for the prevention of Babesiosis in cattle in farms with organic production’ [Zakhody profilaknyky babeziozy velykoyi rohatoyi hudoby v umovakh hospodarstv z orhanichnym vyrobnytstvom], Veterinary Biotechnology [Veterynarna biotekhnolohiia], 27, pp. 169–176. Available at: http://nbuv.gov.ua/UJRN/vbtb_2015_27_23. [in Ukrainian]

Maidannyk, V. G. (2013) ‘Babesiosis in children and adolescents’ [Babezioz u detey i podrostkov], International Journal of Pediatrics, Obstetrics and Gynecology [Mezhdunarodnyy zhurnal pediatrii, akusherstva i ginekologii], 3(1), pp. 82–88. Available at: http://ijpog.org/downloads/4/13.pdf. [in Russian]

Müller, H., Aysul, N., Liu, Z., Salih, D. A., Karagenc, T., Beyer, D., Kullmann, B., Ahmed, J. S. and Seitzer, U. (2010) ‘Development of a loop-mediated isothermal amplification (LAMP) assay for rapid diagnosis of Babesia canis infections’, Transboundary and Emerging Diseases, 57(1–2), pp. 63–65. http://dx.doi.org10.1111/j.1865-1682.2010.01113.x

Peleg, O., Baneth, G., Eyal, O., Inbar, J. and Harrus, S. (2009) ‘Use of chimeric DNA-RNA primers in quantitative PCR for detection of Ehrlichia canis and Babesia canis’, Applied and Environmental Microbiology, 75(19), pp. 6393–6398. http://dx.doi.org10.1128/aem.00720-09

Prus, M. P. (2006) Babesiosis of dogs (epizootology, pathogenethis, and fight measures) [Babezioz sobak (epizootolohiia, patohenez ta zakhody borotby)]. The dissertation thesis for the scientific degree of the doctor of veterinary sciences. Kyiv: National Agricultural University. [in Ukrainian]

Prus, M. P. and Peryn, V. V. (2013) ‘Distribution of Babesiosis in cattle in Ukraine’ [Poshyrennia babeziozu velykoi rohatoi khudoby v Ukraini], Scientific Herald of National University of Life and Environmental Sciences of Ukraine. Series: Veterinary Medicine, Quality and Safety of Products of Stock-Raising [Naukovyi visnyk Natsionalnoho universytetu bioresursiv i pryrodokorystuvannia Ukrainy. Seriia: Veterynarna medytsyna, yakist i bezpeka produktsii tvarynnytstva], 188(3), pp. 221–225. Available at: http://nbuv.gov.ua/UJRN/nvnau_vet_2013_188(3)__46. [in Ukrainian]

Tamura, K., Dudley, J., Nei, M. and Kumar, S. (2007) ‘MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0’, Molecular Biology and Evolution, 24(8), pp. 1596–1599. http://dx.doi.org10.1093/molbev/msm092